STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XFJ2_STRPUEpimerase domain-containing protein. (150 aa)    
Predicted Functional Partners:
W4XPE3_STRPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.860
W4ZJD8_STRPU
RING-type domain-containing protein.
   
  0.860
W4XSI6_STRPU
SCP2 domain-containing protein.
   
  
 0.673
W4YD34_STRPU
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.663
W4YK88_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.657
W4Z3I3_STRPU
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.649
W4YI44_STRPU
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.646
W4Z5W0_STRPU
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.636
W4YGB5_STRPU
S10_plectin domain-containing protein.
   
 0.634
W4XYY1_STRPU
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.627
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.