STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XG60_STRPURap-GAP domain-containing protein. (604 aa)    
Predicted Functional Partners:
W4Z7J3_STRPU
Uncharacterized protein.
 
      0.895
W4XF61_STRPU
NtA domain-containing protein.
   
 0.731
W4XFD6_STRPU
Uncharacterized protein.
   
 0.731
W4XXZ9_STRPU
Rap-GAP domain-containing protein.
   
 0.731
W4Z583_STRPU
Rap-GAP domain-containing protein.
   
 0.731
W4Y2S5_STRPU
Matrin-type domain-containing protein.
      
 0.646
W4YFB3_STRPU
Mediator of RNA polymerase II transcription subunit 21; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.637
W4YYE5_STRPU
RRM domain-containing protein.
      
 0.607
W4XGJ3_STRPU
Uncharacterized protein.
   
 
 0.584
W4XPD2_STRPU
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.574
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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