STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XH48_STRPURRM domain-containing protein. (300 aa)    
Predicted Functional Partners:
W4XF39_STRPU
Uncharacterized protein.
  
 0.957
W4XX49_STRPU
Uncharacterized protein.
   
 0.948
W4YFD8_STRPU
KH domain-containing protein.
   
 0.948
W4ZHQ0_STRPU
Uncharacterized protein.
   
 0.948
W4ZFF7_STRPU
Uncharacterized protein.
  
0.943
W4YIS2_STRPU
Uncharacterized protein.
  
0.942
W4Z7V4_STRPU
Uncharacterized protein.
    
 0.926
W4Z7E1_STRPU
RRM domain-containing protein.
   
 0.913
W4Y5Y6_STRPU
RRM domain-containing protein.
  
 0.861
W4XDZ6_STRPU
RRM domain-containing protein.
  
 0.859
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.