STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XH70_STRPUCCDC92 domain-containing protein. (308 aa)    
Predicted Functional Partners:
W4YGT0_STRPU
PCI domain-containing protein.
    
   0.907
A0A0B4J2W7
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.736
W4Z0L2_STRPU
ANK_REP_REGION domain-containing protein.
    
   0.736
W4XBL1_STRPU
Uncharacterized protein.
    
   0.726
W4XCZ2_STRPU
PCI domain-containing protein.
    
   0.719
W4XIU9_STRPU
VWFA domain-containing protein.
    
   0.687
W4Y0W4_STRPU
Ubiquitin carboxyl-terminal hydrolase.
    
   0.679
W4YA41_STRPU
DUF4201 domain-containing protein.
      
 0.675
W4YK86_STRPU
AAA domain-containing protein.
    
   0.673
W4ZL39_STRPU
PCI domain-containing protein.
    
   0.656
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.