STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XHD9_STRPUHistone H2B; Belongs to the histone H2B family. (124 aa)    
Predicted Functional Partners:
W4XKM5_STRPU
Uncharacterized protein.
    
 0.658
W4ZCX0_STRPU
Uncharacterized protein.
    
 0.658
W4Y3J9_STRPU
Uncharacterized protein.
    
 0.556
W4YBG4_STRPU
TPR_REGION domain-containing protein.
    
 0.556
W4YF99_STRPU
Macro domain-containing protein; Belongs to the histone H2A family.
   
 0.545
W4YI34_STRPU
Macro domain-containing protein; Belongs to the histone H2A family.
   
 0.545
W4XKX2_STRPU
Uncharacterized protein.
    
 0.501
W4XMU0_STRPU
Ubiquitin-like domain-containing protein.
   
 0.494
W4YHN1_STRPU
Ubiquitin-like domain-containing protein.
    
 0.493
H2A.F/Z
Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling. May be involved in the formation of constitutive heterochromatin. May be required for c [...]
   
 0.460
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.