STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XIQ1_STRPUVWFD domain-containing protein. (116 aa)    
Predicted Functional Partners:
W4XPE3_STRPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.623
W4ZJD8_STRPU
RING-type domain-containing protein.
   
  0.623
W4XSI2_STRPU
Uncharacterized protein.
    
 0.431
W4XYU0_STRPU
Uncharacterized protein.
   
 0.428
W4Y1F2_STRPU
Uncharacterized protein.
     
 0.427
W4ZC69_STRPU
WD_REPEATS_REGION domain-containing protein.
    
 0.423
W4ZF96_STRPU
Uncharacterized protein.
    
 0.419
W4ZHJ4_STRPU
Uncharacterized protein.
     
 0.403
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.