STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XL17_STRPUANK_REP_REGION domain-containing protein. (245 aa)    
Predicted Functional Partners:
W4XTL6_STRPU
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.889
W4Y0J4_STRPU
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.830
W4Z5C8_STRPU
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.830
W4XDS5_STRPU
Sec16_C domain-containing protein.
   
 0.800
W4XB13_STRPU
Uncharacterized protein.
   
 0.762
W4XTL8_STRPU
Uncharacterized protein.
   
 0.762
W4ZAQ2_STRPU
Uncharacterized protein.
   
 0.762
W4XPR9_STRPU
zf-Sec23_Sec24 domain-containing protein.
   
 0.687
W4YP89_STRPU
zf-Sec23_Sec24 domain-containing protein.
   
 0.687
W4YW23_STRPU
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.687
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.