STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XMR0_STRPUUncharacterized protein. (1967 aa)    
Predicted Functional Partners:
Rab11
Uncharacterized protein.
   
 0.558
W4YIA5_STRPU
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
 0.557
W4YER2_STRPU
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.541
W4ZB89_STRPU
Uncharacterized protein.
   
 
 0.475
W4ZGC1_STRPU
Uncharacterized protein.
   
 0.473
W4XLS0_STRPU
ACB domain-containing protein.
    
 0.425
W4XVX8_STRPU
ACB domain-containing protein.
    
 0.425
W4XA84_STRPU
Gamma-tubulin complex component.
    
 
 0.419
W4XDX2_STRPU
Uso1_p115_head domain-containing protein.
   
 0.407
W4ZAC5_STRPU
Uncharacterized protein.
   
 0.407
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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