STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XP36_STRPUHomeobox domain-containing protein. (816 aa)    
Predicted Functional Partners:
W4Z8E3_STRPU
Uncharacterized protein.
   
 0.478
W4YK88_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
      
 0.435
A0A0B4J2W2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
      
 0.434
W4YM08_STRPU
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
      
 0.434
W4YMB1_STRPU
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.410
W4Z9M7_STRPU
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.410
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.