STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4XQM4_STRPUUncharacterized protein. (2103 aa)    
Predicted Functional Partners:
W4YVV7_STRPU
Uncharacterized protein.
      
 0.627
W4X9V2_STRPU
Importin N-terminal domain-containing protein.
   
  
 0.595
W4XB14_STRPU
RING-CH-type domain-containing protein.
      
 0.586
W4XN96_STRPU
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P).
      
 0.551
W4Z0U1_STRPU
Importin N-terminal domain-containing protein.
   
  
 0.551
H3JEQ9_STRPU
Sm domain-containing protein.
   
  
 0.544
W4Y137_STRPU
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
      
 0.542
W4YAB8_STRPU
Uncharacterized protein.
      
 0.541
W4XLI0_STRPU
TruB_N domain-containing protein.
      
 0.539
W4Y2A5_STRPU
Nuclear cap-binding protein subunit 2.
      
 0.539
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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