STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Y411_STRPUUncharacterized protein. (1007 aa)    
Predicted Functional Partners:
W4YD27_STRPU
Uncharacterized protein.
    
 0.890
W4XU05_STRPU
TFIIIC_delta domain-containing protein.
   
 0.871
W4XDS3_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.798
W4XP09_STRPU
Uncharacterized protein.
   
 0.797
W4XQ96_STRPU
Uncharacterized protein.
   
 0.797
W4ZGU6_STRPU
TFIIB-type domain-containing protein.
   
 
 0.785
W4YRI1_STRPU
SANT domain-containing protein.
    
 0.784
W4XH07_STRPU
Uncharacterized protein.
    
 0.733
W4YDU1_STRPU
Uncharacterized protein.
   
 
 0.604
W4XN01_STRPU
Uncharacterized protein.
    
 0.600
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.