W4Y580_STRPU protein (Strongylocentrotus purpuratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W4Y580_STRPU

Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (658 aa)

Predicted Functional Partners:

W4XRL1_STRPU

0.912

W4XJU2_STRPU

0.908

W4YXD6_STRPU

0.908

W4YY60_STRPU

0.824

W4XLX8_STRPU

0.679

sec1/munc18

0.635

W4Z7Z6_STRPU

0.632

W4XG11_STRPU

0.619

Sdc

0.578

W4YVV7_STRPU

0.565

Your Current Organism:

Strongylocentrotus purpuratus

NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Sdc	W4Y580_STRPU	W4XJ27	W4Y580	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.578
W4XG11_STRPU	W4Y580_STRPU	W4XG11	W4Y580	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.619
W4XJU2_STRPU	W4Y580_STRPU	W4XJU2	W4Y580	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.908
W4XJU2_STRPU	W4YXD6_STRPU	W4XJU2	W4YXD6	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	Phosphoinositide phospholipase C.	0.901
W4XLX8_STRPU	W4Y580_STRPU	W4XLX8	W4Y580	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.679
W4XRL1_STRPU	W4Y580_STRPU	W4XRL1	W4Y580	Serine/threonine-protein kinase TOR.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.912
W4Y580_STRPU	Sdc	W4Y580	W4XJ27	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.	0.578
W4Y580_STRPU	W4XG11_STRPU	W4Y580	W4XG11	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.619
W4Y580_STRPU	W4XJU2_STRPU	W4Y580	W4XJU2	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.908
W4Y580_STRPU	W4XLX8_STRPU	W4Y580	W4XLX8	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.679
W4Y580_STRPU	W4XRL1_STRPU	W4Y580	W4XRL1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Serine/threonine-protein kinase TOR.	0.912
W4Y580_STRPU	W4YVV7_STRPU	W4Y580	W4YVV7	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Uncharacterized protein.	0.565
W4Y580_STRPU	W4YXD6_STRPU	W4Y580	W4YXD6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Phosphoinositide phospholipase C.	0.908
W4Y580_STRPU	W4YY60_STRPU	W4Y580	W4YY60	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Protein kinase domain-containing protein.	0.824
W4Y580_STRPU	W4Z7Z6_STRPU	W4Y580	W4Z7Z6	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	CARD domain-containing protein.	0.632
W4Y580_STRPU	sec1/munc18	W4Y580	Q6QHY0	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	Syntaxin binding protein; Belongs to the STXBP/unc-18/SEC1 family.	0.635
W4YVV7_STRPU	W4Y580_STRPU	W4YVV7	W4Y580	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.565
W4YXD6_STRPU	W4XJU2_STRPU	W4YXD6	W4XJU2	Phosphoinositide phospholipase C.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.	0.901
W4YXD6_STRPU	W4Y580_STRPU	W4YXD6	W4Y580	Phosphoinositide phospholipase C.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.908
W4YY60_STRPU	W4Y580_STRPU	W4YY60	W4Y580	Protein kinase domain-containing protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.824