STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Y6I6_STRPUGlyco_trans_2-like domain-containing protein. (410 aa)    
Predicted Functional Partners:
W4YMW0_STRPU
Mannosyltransferase.
    
 
 0.837
W4ZBV3_STRPU
Uncharacterized protein.
  
 
 0.759
W4XM60_STRPU
Uncharacterized protein.
    
 
 0.737
W4XSW4_STRPU
Uncharacterized protein.
   
 
 0.708
W4XX92_STRPU
SEC63 domain-containing protein.
   
 
 0.708
W4YIC3_STRPU
J domain-containing protein.
   
 
 0.708
W4X9Z3_STRPU
NTP_transferase domain-containing protein.
  
 
 0.703
W4YHI1_STRPU
Formyl_trans_C domain-containing protein.
  
 
 0.691
W4Z4Y5_STRPU
Formyl_trans_C domain-containing protein.
  
 
 0.691
W4XXC1_STRPU
Uncharacterized protein.
  
  
 0.688
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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