W4Y8Z0_STRPU protein (Strongylocentrotus purpuratus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

W4Y8Z0_STRPU

MOSC domain-containing protein. (372 aa)

Predicted Functional Partners:

W4YF11_STRPU

0.652

W4Z7M2_STRPU

0.564

W4ZGD3_STRPU

0.564

W4Z4Z4_STRPU

0.538

W4ZBX6_STRPU

0.529

W4YWD5_STRPU

0.511

W4ZA88_STRPU

0.511

W4Z164_STRPU

0.505

W4Z4B8_STRPU

0.461

W4XV63_STRPU

0.443

Your Current Organism:

Strongylocentrotus purpuratus

NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
W4XV63_STRPU	W4Y8Z0_STRPU	W4XV63	W4Y8Z0	Uncharacterized protein.	MOSC domain-containing protein.	0.443
W4XV63_STRPU	W4YF11_STRPU	W4XV63	W4YF11	Uncharacterized protein.	Uncharacterized protein.	0.807
W4XV63_STRPU	W4YWD5_STRPU	W4XV63	W4YWD5	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.535
W4XV63_STRPU	W4Z4B8_STRPU	W4XV63	W4Z4B8	Uncharacterized protein.	NAD_binding_1 domain-containing protein.	0.535
W4XV63_STRPU	W4ZA88_STRPU	W4XV63	W4ZA88	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.535
W4Y8Z0_STRPU	W4XV63_STRPU	W4Y8Z0	W4XV63	MOSC domain-containing protein.	Uncharacterized protein.	0.443
W4Y8Z0_STRPU	W4YF11_STRPU	W4Y8Z0	W4YF11	MOSC domain-containing protein.	Uncharacterized protein.	0.652
W4Y8Z0_STRPU	W4YWD5_STRPU	W4Y8Z0	W4YWD5	MOSC domain-containing protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.511
W4Y8Z0_STRPU	W4Z164_STRPU	W4Y8Z0	W4Z164	MOSC domain-containing protein.	Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.	0.505
W4Y8Z0_STRPU	W4Z4B8_STRPU	W4Y8Z0	W4Z4B8	MOSC domain-containing protein.	NAD_binding_1 domain-containing protein.	0.461
W4Y8Z0_STRPU	W4Z4Z4_STRPU	W4Y8Z0	W4Z4Z4	MOSC domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.538
W4Y8Z0_STRPU	W4Z7M2_STRPU	W4Y8Z0	W4Z7M2	MOSC domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.564
W4Y8Z0_STRPU	W4ZA88_STRPU	W4Y8Z0	W4ZA88	MOSC domain-containing protein.	FAD-binding FR-type domain-containing protein.	0.511
W4Y8Z0_STRPU	W4ZBX6_STRPU	W4Y8Z0	W4ZBX6	MOSC domain-containing protein.	MOSC domain-containing protein.	0.529
W4Y8Z0_STRPU	W4ZGD3_STRPU	W4Y8Z0	W4ZGD3	MOSC domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.564
W4YF11_STRPU	W4XV63_STRPU	W4YF11	W4XV63	Uncharacterized protein.	Uncharacterized protein.	0.807
W4YF11_STRPU	W4Y8Z0_STRPU	W4YF11	W4Y8Z0	Uncharacterized protein.	MOSC domain-containing protein.	0.652
W4YF11_STRPU	W4YWD5_STRPU	W4YF11	W4YWD5	Uncharacterized protein.	NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.	0.958
W4YF11_STRPU	W4Z164_STRPU	W4YF11	W4Z164	Uncharacterized protein.	Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.	0.848
W4YF11_STRPU	W4Z4B8_STRPU	W4YF11	W4Z4B8	Uncharacterized protein.	NAD_binding_1 domain-containing protein.	0.606