STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Y9R1_STRPUAlpha-amylase. (706 aa)    
Predicted Functional Partners:
W4Y268_STRPU
Alpha-amylase_C domain-containing protein.
  
 
 0.956
W4XD09_STRPU
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.814
W4ZHD3_STRPU
GDE_C domain-containing protein.
   
 0.747
W4YPD2_STRPU
Uncharacterized protein.
  
 
 0.707
W4Z6K6_STRPU
P-type domain-containing protein.
  
 
 0.707
W4Z6T2_STRPU
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.707
W4ZIT9_STRPU
Aamy domain-containing protein.
  
 
 0.586
W4ZH86_STRPU
Protein YIPF.
  
 
 0.575
W4YBT4_STRPU
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.539
W4XHV8_STRPU
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.493
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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