STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YCJ8_STRPUUncharacterized protein. (430 aa)    
Predicted Functional Partners:
W4X9V2_STRPU
Importin N-terminal domain-containing protein.
   
 0.910
W4Y2A5_STRPU
Nuclear cap-binding protein subunit 2.
   
 
 0.748
W4YMU9_STRPU
Uncharacterized protein.
   
 
 0.727
W4YTL8_STRPU
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.703
W4XVY7_STRPU
Tyrosine--tRNA ligase.
   
  
 0.666
W4YKV5_STRPU
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.666
W4Y1F2_STRPU
Uncharacterized protein.
   
 
 0.647
W4Y6T8_STRPU
MIF4G domain-containing protein.
   
 
 0.597
W4Y6T9_STRPU
MIF4G_like_2 domain-containing protein.
   
 
 0.597
W4XGL9_STRPU
Guanylate kinase-like domain-containing protein.
   
 
 0.594
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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