STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YED1_STRPUNACHT domain-containing protein. (976 aa)    
Predicted Functional Partners:
W4YDM6_STRPU
Ubiquitin carboxyl-terminal hydrolase.
    
 0.468
W4XMU0_STRPU
Ubiquitin-like domain-containing protein.
    
  0.455
W4YHN1_STRPU
Ubiquitin-like domain-containing protein.
   
  0.425
W4XXU0_STRPU
Protein kinase domain-containing protein.
   
 0.423
W4XXU1_STRPU
Protein kinase domain-containing protein.
   
 0.423
W4YM16_STRPU
Protein kinase domain-containing protein.
   
 0.423
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.