STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YK95_STRPUUncharacterized protein. (194 aa)    
Predicted Functional Partners:
W4ZCC7_STRPU
Sm domain-containing protein.
    
 
 0.888
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
 
 0.880
W4XNC2_STRPU
Sm domain-containing protein.
    
 
 0.879
W4YUC8_STRPU
Sm domain-containing protein.
    
 
 0.863
W4XUS6_STRPU
Uncharacterized protein.
    
 
 0.754
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.754
W4YLX1_STRPU
Nop domain-containing protein.
    
 
 0.663
W4YVC0_STRPU
Uncharacterized protein.
   
 
 0.540
W4YVC1_STRPU
PWI domain-containing protein.
   
 
 0.540
W4XWM0_STRPU
Uncharacterized protein.
    
 
 0.456
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.