STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YM80_STRPUPHD-type domain-containing protein. (616 aa)    
Predicted Functional Partners:
W4XRL6_STRPU
Uncharacterized protein.
   
 
 0.935
W4XIM4_STRPU
Uncharacterized protein.
   
 
 0.930
W4XZG8_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.918
W4YL40_STRPU
WD_REPEATS_REGION domain-containing protein.
    
 
 0.877
W4ZE98_STRPU
Uncharacterized protein.
    
 
 0.869
W4XN53_STRPU
Uncharacterized protein.
    
 
 0.832
W4YRJ0_STRPU
B30.2/SPRY domain-containing protein.
   
 
 0.696
W4XES2_STRPU
Uncharacterized protein.
   
 
 0.555
W4XX89_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.555
W4YVG6_STRPU
Uncharacterized protein.
   
  
 0.555
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.