STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YN26_STRPUAAA_11 domain-containing protein. (2177 aa)    
Predicted Functional Partners:
W4XIG4_STRPU
Uncharacterized protein.
   
 
 0.845
W4XW60_STRPU
Uncharacterized protein.
   
 
 0.845
W4Z9Q2_STRPU
Uncharacterized protein.
   
 
 0.845
W4Y5N0_STRPU
Uncharacterized protein.
    
 
 0.740
W4XS43_STRPU
Uncharacterized protein.
   
  
 0.655
W4YZP4_STRPU
RNase H domain-containing protein.
    
 
 0.648
W4ZFK8_STRPU
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.644
W4ZIG8_STRPU
Uncharacterized protein.
   
 
 0.620
W4ZH02_STRPU
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 
 0.609
W4Y2A5_STRPU
Nuclear cap-binding protein subunit 2.
    
 
 0.605
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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