STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YN42_STRPUUncharacterized protein. (292 aa)    
Predicted Functional Partners:
W4XBR9_STRPU
Uncharacterized protein.
   
 0.909
W4YU20_STRPU
Uncharacterized protein.
   
 0.909
W4Z4H3_STRPU
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.832
W4YM26_STRPU
Sorting nexin; Involved in several stages of intracellular trafficking.
   
 0.780
W4YW58_STRPU
PX domain-containing protein.
   
 0.780
W4XPY2_STRPU
Uncharacterized protein.
  
   
 0.735
W4XRC1_STRPU
RING-type domain-containing protein.
   
    0.686
W4XNH5_STRPU
PX domain-containing protein.
   
 0.655
VAMP
V-SNARE coiled-coil homology domain-containing protein.
    
 0.651
W4YKL5_STRPU
Uncharacterized protein.
      
 0.605
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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