STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YPS4_STRPUSm domain-containing protein. (196 aa)    
Predicted Functional Partners:
W4Z7B1_STRPU
Small nuclear ribonucleoprotein Sm D3.
   
 0.992
W4YUT2_STRPU
Sm domain-containing protein.
   
 0.991
W4XB80_STRPU
Small nuclear ribonucleoprotein G.
   
 0.990
W4YA42_STRPU
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.983
W4XFJ7_STRPU
Uncharacterized protein.
    
 0.980
W4XNC2_STRPU
Sm domain-containing protein.
   
 0.971
W4Y227_STRPU
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.971
W4ZCC7_STRPU
Sm domain-containing protein.
   
 0.971
A0A0B4J2V9
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.969
A0A0B4J2W1
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.969
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.