STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YQ03_STRPUUncharacterized protein. (66 aa)    
Predicted Functional Partners:
H3HLD5_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.997
W4Y489_STRPU
Uncharacterized protein.
   
 
 0.997
W4YD34_STRPU
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.997
W4YK88_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.997
W4YR85_STRPU
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 
 0.997
W4Z3I3_STRPU
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.997
W4ZJ59_STRPU
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.997
W4XPE3_STRPU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 
 0.996
W4ZJD8_STRPU
RING-type domain-containing protein.
   
 
 0.996
W4XXP9_STRPU
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.995
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.