STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YQ16_STRPUSpc7 domain-containing protein. (639 aa)    
Predicted Functional Partners:
W4XM86_STRPU
Uncharacterized protein.
   
 0.980
W4XRZ5_STRPU
Uncharacterized protein.
   
 0.972
W4Z6R9_STRPU
RECA_2 domain-containing protein.
   
 0.967
W4Y037_STRPU
Uncharacterized protein.
   
 0.944
W4YZX8_STRPU
DUF5595 domain-containing protein.
   
 0.925
W4Y3W9_STRPU
DEAD domain-containing protein.
  
 0.901
W4YYN8_STRPU
Helicase C-terminal domain-containing protein.
  
 0.901
W4ZGZ4_STRPU
HRDC domain-containing protein.
  
 0.901
W4YXN3_STRPU
Uncharacterized protein.
   
 0.875
W4Y561_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.853
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.