STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YUU1_STRPUUncharacterized protein. (142 aa)    
Predicted Functional Partners:
W4XV11_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.980
W4ZFU4_STRPU
Nucleolar protein 6.
   
 0.975
W4YWK6_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.973
W4Y4E6_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.951
W4Y0P9_STRPU
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.948
W4XTB8_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.945
W4YHT2_STRPU
Uncharacterized protein.
   
 0.943
W4Y2F8_STRPU
Nop domain-containing protein.
   
 0.939
W4Z4U0_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.939
W4YET0_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.933
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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