STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4YYY9_STRPUUncharacterized protein. (1335 aa)    
Predicted Functional Partners:
W4YHU3_STRPU
Uncharacterized protein.
      
 0.689
W4YFS5_STRPU
RRM domain-containing protein.
      
 0.653
W4YGC3_STRPU
Uncharacterized protein; Belongs to the DEAD box helicase family.
      
 0.651
W4YJG3_STRPU
Aquarius_N domain-containing protein.
      
 0.637
W4YWQ3_STRPU
Uncharacterized protein.
   
  
 0.613
W4Y4P5_STRPU
RRM domain-containing protein.
      
 0.589
W4YB21_STRPU
C2 NT-type domain-containing protein.
      
 0.586
W4Z6M4_STRPU
PIPK domain-containing protein.
      
 0.586
W4YUW6_STRPU
Uncharacterized protein.
      
 0.584
W4XLW3_STRPU
zf-C3Hc3H domain-containing protein.
      
 0.574
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.