STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z0A4_STRPUUncharacterized protein. (108 aa)    
Predicted Functional Partners:
W4XHE7_STRPU
ER membrane protein complex subunit 3.
   
 
 0.987
W4YHS0_STRPU
TPR_REGION domain-containing protein.
    
 
 0.986
W4Z251_STRPU
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.985
W4XFA6_STRPU
DUF2012 domain-containing protein.
   
 
 0.981
W4YX12_STRPU
Uncharacterized protein.
    
 
 0.979
W4XDM3_STRPU
Uncharacterized protein.
    
 
 0.859
W4XFN3_STRPU
Uncharacterized protein.
    
 
 0.859
W4XFN4_STRPU
Uncharacterized protein.
    
 
 0.859
W4YD53_STRPU
Uncharacterized protein.
    
 
 0.859
W4XF18_STRPU
Uncharacterized protein.
    
 
 0.748
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.