STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z0P4_STRPUUncharacterized protein. (556 aa)    
Predicted Functional Partners:
Rab7
Uncharacterized protein.
    
 0.663
W4Y3R3_STRPU
Uncharacterized protein.
    
   0.566
W4YPK1_STRPU
Uncharacterized protein.
    
   0.566
W4XUS3_STRPU
Death domain-containing protein.
    
 
 0.500
W4Y013_STRPU
Uncharacterized protein.
    
 
 0.500
W4Y014_STRPU
Uncharacterized protein.
    
 
 0.500
W4ZA34_STRPU
Death domain-containing protein.
    
 
 0.500
W4ZKR7_STRPU
ANK_REP_REGION domain-containing protein.
    
 
 0.500
W4XM11_STRPU
Uncharacterized protein.
    
 0.483
W4YQ50_STRPU
BTB domain-containing protein.
    
 0.483
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.