STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z122_STRPUUncharacterized protein. (987 aa)    
Predicted Functional Partners:
W4YAA7_STRPU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.999
W4ZJ69_STRPU
Protein kinase domain-containing protein.
   
 0.978
W4XLS1_STRPU
Uncharacterized protein.
   
 0.969
W4YAP6_STRPU
Uncharacterized protein.
   
 0.915
W4Z0C6_STRPU
Uncharacterized protein.
   
 
 0.913
W4ZH02_STRPU
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.897
W4Y7F3_STRPU
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.896
W4ZKJ0_STRPU
RRM domain-containing protein.
    
 0.882
W4YR71_STRPU
Uncharacterized protein.
   
 0.871
W4XBZ7_STRPU
Uncharacterized protein.
    
 0.870
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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