STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z3D3_STRPURBR-type E3 ubiquitin transferase. (442 aa)    
Predicted Functional Partners:
W4XTK4_STRPU
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.979
W4Z1L4_STRPU
RING-type domain-containing protein.
    
 
 0.946
H3HW17_STRPU
ANK_REP_REGION domain-containing protein.
 
  
 0.936
W4YUC9_STRPU
Ubiquitin-like domain-containing protein.
   
 0.893
W4YAQ8_STRPU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.888
W4Y0G7_STRPU
Uncharacterized protein.
    
 
 0.655
W4YP28_STRPU
Uncharacterized protein.
 
 
    0.653
W4Z5G2_STRPU
Uncharacterized protein.
    
 
 0.611
W4YHN1_STRPU
Ubiquitin-like domain-containing protein.
    
  0.587
W4YLG7_STRPU
Uncharacterized protein.
      
 0.587
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.