STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z3M3_STRPURhomboid domain-containing protein. (269 aa)    
Predicted Functional Partners:
W4Y3K8_STRPU
Uncharacterized protein.
    
 
 0.866
W4YUC0_STRPU
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 
 0.866
Q964G0_STRPU
Cyclin D; Belongs to the cyclin family.
      
 0.779
W4XII1_STRPU
Rhomboid domain-containing protein.
      
 0.778
W4X9N3_STRPU
Uncharacterized protein.
   
  
 0.674
W4XUZ9_STRPU
BHLH domain-containing protein.
   
 
 0.666
W4XZP5_STRPU
UBA domain-containing protein.
      
 0.648
W4Y229_STRPU
ThiF domain-containing protein.
      
 0.648
W4Z853_STRPU
Signal peptidase complex catalytic subunit SEC11.
      
 0.634
W4XAW4_STRPU
Nuclear receptor domain-containing protein.
      
 0.587
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.