STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z6W6_STRPUPeptidase_M48_N domain-containing protein. (81 aa)    
Predicted Functional Partners:
W4XJY3_STRPU
Uncharacterized protein.
    
 
 0.712
W4YFP4_STRPU
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
  
 0.611
W4Z428_STRPU
Protein-S-isoprenylcysteine O-methyltransferase.
    
 
 0.563
W4YYX5_STRPU
Uncharacterized protein; Belongs to the GroES chaperonin family.
  
  
 0.538
W4XCS3_STRPU
Uncharacterized protein.
     
 0.458
W4YQY8_STRPU
PMSR domain-containing protein.
  
  
 0.438
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
  
 0.414
W4YBE6_STRPU
Peptidase_M48 domain-containing protein.
      
 0.412
W4YZ08_STRPU
PHB domain-containing protein.
   
  
 0.412
W4XXF1_STRPU
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.403
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.