STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4Z9N9_STRPUDUF4817 domain-containing protein. (370 aa)    
Predicted Functional Partners:
W4XVM3_STRPU
Chromo domain-containing protein.
   
 0.912
W4Y0W0_STRPU
Uncharacterized protein.
   
 0.912
W4Z5A6_STRPU
Chromo domain-containing protein.
   
 0.912
W4Z8M8_STRPU
Chromo domain-containing protein.
   
 0.912
W4Z0T7_STRPU
Uncharacterized protein.
    
 0.726
W4YBN8_STRPU
Uncharacterized protein.
   
 0.638
W4YTL8_STRPU
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.588
W4YHN1_STRPU
Ubiquitin-like domain-containing protein.
    
 0.580
W4YUV9_STRPU
Uncharacterized protein.
    
 0.552
W4ZD45_STRPU
Uncharacterized protein.
    
 0.552
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.