STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZA46_STRPUUncharacterized protein. (367 aa)    
Predicted Functional Partners:
W4YT39_STRPU
Uncharacterized protein.
    
 0.526
W4ZF89_STRPU
PALB2_WD40 domain-containing protein.
   
 
 0.522
W4Z3R1_STRPU
RmlD_sub_bind domain-containing protein.
  
 
 0.490
W4YVQ8_STRPU
Uncharacterized protein.
  
 
 0.483
W4ZI02_STRPU
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
 0.483
W4XUD9_STRPU
Uncharacterized protein.
   
 
 0.468
W4YM32_STRPU
Uncharacterized protein.
   
 
 0.468
W4YWC6_STRPU
Uncharacterized protein.
   
 
 0.468
W4Z9N1_STRPU
Uncharacterized protein.
   
 
 0.468
W4ZBX2_STRPU
Uncharacterized protein.
   
 
 0.468
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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