STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZAZ2_STRPUDRIM domain-containing protein. (719 aa)    
Predicted Functional Partners:
W4Y5Q1_STRPU
Uncharacterized protein.
 
     0.949
W4XAE8_STRPU
Uncharacterized protein.
 
     0.948
W4Y0P9_STRPU
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.946
W4ZFU4_STRPU
Nucleolar protein 6.
   
 0.946
W4XV11_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 
 0.945
W4YF91_STRPU
Uncharacterized protein.
 
     0.942
W4Y3M6_STRPU
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.922
W4Y4E6_STRPU
WD_REPEATS_REGION domain-containing protein.
   
 0.922
W4ZFB7_STRPU
Uncharacterized protein.
   
 0.917
W4XQ41_STRPU
PINc domain-containing protein.
   
 0.915
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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