STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZB87_STRPUUncharacterized protein. (825 aa)    
Predicted Functional Partners:
W4XJE5_STRPU
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.893
W4Y7T5_STRPU
Uncharacterized protein.
   
 0.893
W4Y328_STRPU
CP-type G domain-containing protein.
  
 0.887
W4Y4P5_STRPU
RRM domain-containing protein.
   
 0.851
W4XNW4_STRPU
Uncharacterized protein.
   
 0.813
W4Y3P1_STRPU
Uncharacterized protein.
   
 0.791
W4ZD28_STRPU
Uncharacterized protein.
   
 0.791
W4YGC3_STRPU
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.788
W4YIK5_STRPU
RNA helicase.
  
 
0.778
W4XFN0_STRPU
PUA domain-containing protein.
  
 
 0.775
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.