STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZDW4_STRPUANK_REP_REGION domain-containing protein. (1218 aa)    
Predicted Functional Partners:
W4Y5N0_STRPU
Uncharacterized protein.
   
 0.997
W4Z091_STRPU
BRCT domain-containing protein.
    
 0.972
W4Y0R1_STRPU
Uncharacterized protein.
    
 0.912
W4YF83_STRPU
Uncharacterized protein.
    
 0.912
W4YFU4_STRPU
Metallophos domain-containing protein.
   
 0.889
W4YR30_STRPU
Mre11_DNA_bind domain-containing protein; Belongs to the MRE11/RAD32 family.
   
 0.889
W4ZIU3_STRPU
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.889
W4XMU0_STRPU
Ubiquitin-like domain-containing protein.
    
  0.885
W4YHN1_STRPU
Ubiquitin-like domain-containing protein.
    
  0.876
W4YJ73_STRPU
Uncharacterized protein.
   
 0.846
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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