STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZF99_STRPUDUF2451 domain-containing protein. (68 aa)    
Predicted Functional Partners:
W4YQ68_STRPU
Uncharacterized protein.
    
 
 0.927
W4XI91_STRPU
C2H2-type domain-containing protein.
   
 
 0.776
W4XXL5_STRPU
WD_REPEATS_REGION domain-containing protein.
    
 
 0.773
W4XHX5_STRPU
Uncharacterized protein.
    
 
 0.745
W4YGT1_STRPU
Uncharacterized protein.
    
 
 0.745
W4YHX0_STRPU
Uncharacterized protein.
    
 
 0.745
W4XBW9_STRPU
Uncharacterized protein.
   
 
 0.700
W4XSR2_STRPU
Uncharacterized protein.
   
 
 0.700
W4XBR9_STRPU
Uncharacterized protein.
   
  
 0.554
W4YU20_STRPU
Uncharacterized protein.
   
  
 0.554
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.