STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZGC0_STRPUSCP domain-containing protein; Belongs to the CRISP family. (1055 aa)    
Predicted Functional Partners:
W4YWL6_STRPU
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
 0.984
W4Z8D8_STRPU
TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
 0.984
W4XFY9_STRPU
Uncharacterized protein.
  
 0.936
W4XB27_STRPU
GTSE1_N domain-containing protein.
  
 0.895
W4XGU7_STRPU
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
 
      0.889
W4YHI1_STRPU
Formyl_trans_C domain-containing protein.
  
  
 0.720
W4XVY7_STRPU
Tyrosine--tRNA ligase.
  
  
 0.701
W4YKV5_STRPU
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.701
W4XWZ4_STRPU
PseudoU_synth_1 domain-containing protein.
  
  
 0.665
W4ZD15_STRPU
Uncharacterized protein.
      
 0.662
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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