STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4ZI64_STRPUUncharacterized protein. (68 aa)    
Predicted Functional Partners:
W4YCX4_STRPU
Uncharacterized protein.
    
 
 0.781
W4Z4H3_STRPU
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.745
W4XQP8_STRPU
COMM domain-containing protein.
    
 
 0.684
W4XNG2_STRPU
Uncharacterized protein.
   
 
 0.647
W4XMN1_STRPU
COMM domain-containing protein.
    
 
 0.644
W4XA92_STRPU
COMM domain-containing protein.
    
 
 0.596
W4XC37_STRPU
Uncharacterized protein.
    
 
 0.567
W4ZDE2_STRPU
Uncharacterized protein.
    
 
 0.567
W4Y3Y1_STRPU
COMM domain-containing protein.
    
 
 0.557
W4Y3Y2_STRPU
COMM domain-containing protein.
    
 
 0.557
Your Current Organism:
Strongylocentrotus purpuratus
NCBI taxonomy Id: 7668
Other names: S. purpuratus, purple sea urchin, purple urchin
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