Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
bcrABacitracin ABC transporter, ATP-binding protein BcrA. (341 aa)    
Predicted Functional Partners:
AFN46762.1
ABC transporter, ATP-binding protein.
 
    
0.903
AFN45756.1
Hypothetical protein.
  
    0.777
AFN46376.1
Hypothetical protein.
  
    0.777
AFN45103.1
Histidine kinase.
       0.773
AFN46001.1
Response regulator receiver domain protein.
  
    0.719
AFN47550.1
Putative membrane protein.
  
    0.690
AFN47287.1
Putative membrane protein.
  
    0.689
AFN47517.1
Hypothetical protein.
       0.618
AFN46908.1
Putative membrane protein.
  
    0.504
AFN47666.1
Transaldolase.
       0.451
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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