STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47446.1Putative 5-deoxy-glucuronate isomerase. (290 aa)    
Predicted Functional Partners:
AFN46097.1
Carbohydrate kinase, PfkB family.
 
 0.999
AFN44986.1
Putative 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.999
AFN45547.1
AP endonuclease, family 2.
  
 0.925
AFN46463.1
AP endonuclease, family 2.
  
 0.912
idhA
Inositol 2-dehydrogenase.
 
  
 0.854
AFN47209.1
Oxidoreductase, NAD-binding domain protein.
 
  
 0.763
AFN46099.1
Hypothetical protein.
   
    0.750
AFN45401.1
Carbohydrate kinase, PfkB family.
 
  
 0.720
AFN46043.1
Inositol 2-dehydrogenase family protein.
 
  
 0.719
AFN47150.1
UbiC transcription regulator-associated domain protein.
 
     0.701
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.