Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AFN47386.1ABC-2 type transporter. (285 aa)    
Predicted Functional Partners:
AFN46406.1
ABC transporter, ATP-binding protein.
    0.951
AFN47280.1
ABC transporter, ATP-binding protein.
 
    0.706
AFN44970.1
ABC transporter, permease protein, DrrB family.
  
  
  0.701
AFN45977.1
ABC transporter, permease protein, DrrB family.
 
  
  0.691
AFN47642.1
Putative membrane protein.
  
    0.636
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
    0.595
AFN46047.1
ABC transporter, ATP-binding protein.
 
    0.545
AFN47468.1
ABC-2 type transporter.
  
  
  0.516
AFN46414.1
Putative nodulation ATP-binding protein I.
  
    0.465
AFN47584.1
ABC transporter, solute-binding protein.
  
  
  0.454
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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