STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46272.1ABC transporter, solute-binding protein. (408 aa)    
Predicted Functional Partners:
AFN47242.1
ABC transporter, permease protein.
  0.996
AFN44964.1
ABC transporter, permease protein.
 
 
 0.962
AFN47695.1
ABC transporter, permease protein.
 
 
 0.847
AFN47051.1
ABC transporter, permease protein.
   0.839
AFN46778.1
alpha-L-fucosidase.
 
     0.836
AFN46959.1
ABC transporter, permease protein.
 
 
 0.818
AFN47790.1
ABC transporter, permease protein.
  
 
 0.810
AFN45296.1
ABC transporter, permease protein.
 
 0.804
AFN44931.1
ABC transporter, permease protein.
 
 
 0.774
AFN47229.1
ABC transporter, permease protein.
 
 
 0.742
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.