STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN44976.1Sel1 repeat protein. (831 aa)    
Predicted Functional Partners:
AFN44937.1
Tetratricopeptide repeat protein.
 
     0.725
polA
DNA polymerase I, thermostable; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.674
AFN45146.1
Hypothetical protein.
       0.574
AFN47002.1
Hypothetical protein.
 
    0.504
AFN47235.1
CRISPR-associated RAMP protein.
  
    0.485
AFN45907.1
Hypothetical protein.
 
     0.470
AFN45541.1
Putative ADP-ribosyl-[dinitrogen reductase] glycohydrolase.
  
     0.466
AFN45044.1
WD domain, G-beta repeat protein.
  
     0.449
AFN46502.1
Sel1 repeat protein.
 
   
 0.438
AFN47003.1
Glycosyl hydrolase family 16.
  
     0.436
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.