STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eccBType VII secretion protein EccB. (458 aa)    
Predicted Functional Partners:
AFN45655.1
Putative type VII secretion integral membrane protein EccD.
 
 
 0.966
eccCa_1
Type VII secretion protein EccCa.
 
 
 0.863
eccCa_3
Type VII secretion protein EccCa.
 
 
 0.835
eccCa_2
Type VII secretion protein EccCa.
 
 
 0.817
AFN45153.1
Hypothetical protein.
 
   
 0.721
AFN45091.1
Hypothetical protein; Belongs to the WXG100 family.
  
 
 0.714
AFN46496.1
Hypothetical protein.
  
     0.678
AFN45261.1
Efflux ABC transporter, permease protein.
  
     0.671
AFN47235.1
CRISPR-associated RAMP protein.
  
     0.667
AFN46850.1
Putative CRISPR-associated protein.
  
     0.626
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.