Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46813.1FHA domain protein. (368 aa)    
Predicted Functional Partners:
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 
 0.897
AFN46638.1
Putative serine/threonine-protein kinase PrkC.
   
 
 0.888
AFN46195.1
Putative serine/threonine-protein kinase PrkC.
   
 
 0.888
AFN46526.1
Putative membrane protein.
       0.773
AFN47047.1
Hypothetical protein.
 
     0.753
AFN46450.1
Fibronectin type III domain protein.
 
     0.744
eccCa_1
Type VII secretion protein EccCa.
 
    0.660
AFN47257.1
Kinase domain protein.
 
 
 
 0.610
AFN45219.1
Hypothetical protein.
  
     0.541
AFN45602.1
Hypothetical protein.
  
     0.539
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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