STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45998.1ABC transporter, ATP-binding protein. (587 aa)    
Predicted Functional Partners:
AFN46797.1
ABC transporter, ATP-binding protein.
 
    
0.901
AFN47507.1
Putative glutamine ABC transporter, ATP-binding protein GlnQ.
 
     
0.900
AFN47622.1
ABC transporter, ATP-binding protein.
 
    
0.828
AFN46501.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
 
     
0.721
AFN46794.1
ABC transporter, ATP-binding protein.
 
    
0.704
AFN46764.1
ABC transporter, ATP-binding protein.
 
     
0.692
AFN45890.1
ABC transporter, ATP-binding protein.
 
    
0.641
AFN47594.1
ABC-type cobalt transport system, permease protein.
       0.636
AFN47463.1
KR domain protein.
  
 0.613
AFN45504.1
ABC transporter, ATP-binding protein.
    
0.560
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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