STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45848.1Cytochrome d ubiquinol oxidase, subunit II-like protein. (354 aa)    
Predicted Functional Partners:
cydA
Cytochrome d ubiquinol oxidase, subunit I.
 0.999
AFN45223.1
ABC transporter, ATP-binding protein.
  
  
 0.870
AFN47106.1
ABC transporter, ATP-binding protein.
  
  
 0.870
sdhA_1
Succinate dehydrogenase flavoprotein subunit.
     
 0.701
sdhA_2
Succinate dehydrogenase flavoprotein subunit.
     
 0.701
AFN47784.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
     
 0.640
AFN45075.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
     
 0.640
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
      
 0.606
AFN46434.1
Pyridine nucleotide-disulfide oxidoreductase.
 
   
 0.595
AFN47382.1
Transcriptional regulator, BlaI/MecI/CopY family.
       0.557
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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