STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45402.1Rieske [2Fe-2S] domain protein. (108 aa)    
Predicted Functional Partners:
AFN47718.1
Transcriptional regulator, TetR family.
 
     0.810
cbiX_1
Sirohydrochlorin cobaltochelatase.
  
  
 0.655
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
  
 0.651
narH
Nitrate reductase, beta subunit.
  
  
 0.595
AFN46583.1
Hypothetical protein.
       0.552
narJ
Nitrate reductase molybdenum cofactor assembly chaperone.
  
  
 0.511
AFN46994.1
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.501
AFN45644.1
Hypothetical protein.
  
     0.485
AFN45828.1
Type III restriction enzyme, res subunit.
 
     0.479
narI
Respiratory nitrate reductase, gamma subunit.
  
  
 0.459
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.